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Lee, Semin
Computational Biology Lab.
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BIPA: a database for protein-nucleic acid interaction in 3D structures

Author(s)
Lee, SeminBlundell, Tom L.
Issued Date
2009-06
DOI
10.1093/bioinformatics/btp243
URI
https://scholarworks.unist.ac.kr/handle/201301/18895
Fulltext
http://bioinformatics.oxfordjournals.org/content/25/12/1559
Citation
BIOINFORMATICS, v.25, no.12, pp.1559 - 1560
Abstract
BIPA is a database for protein-nucleic acid interactions in 3D structures. The database provides various physicochemical features of protein-nucleic acid interface such as size, shape, residue propensity, secondary structure composition and intermolecular interactions. The database also contains multiple structural alignments of nucleic acid-binding protein families with annotations of local environments in order to allow definition of features that influence acceptability of mutations at a particular position in a protein family. A web interface has been designed to present the results of these analyses and facilitate navigation of protein-nucleic acid interfaces
Publisher
OXFORD UNIV PRESS
ISSN
1367-4803

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