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- Kim, Donghyuk
- Systems Biology and Machine Learning Lab.
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Draft genome sequence of a bacterial plant pathogen Erwinia pyrifoliae strain EpK1/15 isolated from an apple twig showing black shoot blight
- Author(s)
- Lee, Gyu Min, Oh, Eom-Ji, Ko, Seyoung, Park, Jungkum, Park, Duck Hwan, Kim, Donghyuk, Oh, Chang-Sik
- Issued Date
- 2018-04
- Citation
- KOREAN JOURNAL OF MICROBIOLOGY, v.54, no.1, pp.69 - 70
- Abstract
- Erwinia pyrifoliae is a Gram-negative bacterium causing black shoot blight in apple and Asian pear trees. E. pyrifoliae strain EpK1/15 was isolated in 2014 from an apple twig from the Pocheon, Gyeonggi-do, South Korea. In this study, we report the draft genome sequence of E. pyrifoliae EpK1/15 using PacBio RS II platform. The draft genome is comprised of a circular chromosome with 4,027,225 bp and 53.4% G + C content and a plasmid with 48,456 bp and 50.3% G + C content. The draft genome includes 3,798 protein-coding genes, 22 rRNA genes, 77 tRNA genes, 13 non-coding RNA genes, and 231 pseudo genes.
- Publisher
- The Microbiological Society of Korea
- ISSN
- 0440-2413
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