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- Jeong, Joonwoo
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MFAML: a standard data structure for representing and exchanging metabolic flux models
- Author(s)
- Yun, Hongseok, Lee, Dong-Yup, Jeong, Joonwoo, Lee, Seunghyun, Lee, Sang Yup
- Issued Date
- 2005-08
- Citation
- BIOINFORMATICS, v.21, no.15, pp.3329 - 3330
- Abstract
- MFAML is a standard data structure designed for the formal representation and effective exchange of metabolic flux models. It allows for the explicit description of stationary states of a metabolic system by defining environmental/genetic conditions of the system, e.g. flux measurements, balancing constraints and physiological objectives as well as basic information on metabolites and reactions. In addition, a library of MFAML comprising a model parser and a converter provides an open framework for establishing the pipeline from metabolic modeling to metabolic flux analysis. Availability: MFAML (version 1) is fully described and available at http://mbel.kaist.ac.kr/mfaml/ Contact:leesy@kaist.ac.k
- Publisher
- OXFORD UNIV PRESS
- ISSN
- 1367-4803
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