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Bhak, Jong
KOrean GenomIcs Center(KOGIC)
Research Interests
  • Geromics, genomics, bioinformatics, protein Engineering, OMICS

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MassNet: a functional annotation service for protein mass spectrometry data

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dc.contributor.author Park, Daeui ko
dc.contributor.author Kim, Byoung-Chul ko
dc.contributor.author Cho, Seong-Woong ko
dc.contributor.author Park, Seong-Jin ko
dc.contributor.author Choi, Jong-Soon ko
dc.contributor.author Kim, Seung Il ko
dc.contributor.author Bhak, Jong Hwa ko
dc.contributor.author Lee, Sunghoon ko
dc.date.available 2015-08-03T02:25:18Z -
dc.date.created 2015-08-03 ko
dc.date.issued 2008-07 -
dc.identifier.citation NUCLEIC ACIDS RESEARCH, v.36, no.Web Server, pp.W491 - W495 ko
dc.identifier.issn 0305-1048 ko
dc.identifier.uri https://scholarworks.unist.ac.kr/handle/201301/13244 -
dc.identifier.uri http://nar.oxfordjournals.org/content/36/suppl_2/W491 ko
dc.description.abstract Although mass spectrometry has been frequently used to identify proteins, there are no web servers that provide comprehensive functional annotation of those identified proteins. It is necessary to provide such web service due to a rapid increase in the data. We, therefore, introduce MassNet, which provides (i) physico-chemical analysis information, (ii) KEGG pathway assignment (iii) Gene Ontology mapping and (iv) proteinprotein interaction (PPI) prediction for the data from MASCOT, Prospector and Profound. MassNet provides the prediction information for PPIs using both 3D structural interaction and experimental interaction deposited in PSIMAP, BIND, DIP, HPRD, IntAct, MINT, CYGD and BioGrid. The web service is freely available at http://massnet.kr or http://sequenceome.kobic.re.kr/MassNet/ ko
dc.description.statementofresponsibility close -
dc.language ENG ko
dc.publisher OXFORD UNIV PRESS ko
dc.subject MOLECULAR INTERACTION DATABASE ko
dc.subject GENE ONTOLOGY ko
dc.subject PROTEOMICS ko
dc.subject INTERACTOME ko
dc.subject PREDICTION ko
dc.subject SEQUENCE ko
dc.subject GENOMES ko
dc.subject YEAST ko
dc.title MassNet: a functional annotation service for protein mass spectrometry data ko
dc.title.alternative MassNet: a functional annotation service for protein mass spectrometry data. ko
dc.type ARTICLE ko
dc.identifier.scopusid 2-s2.0-48449097393 ko
dc.identifier.wosid 000258142300090 ko
dc.type.rims ART ko
dc.description.wostc 4 *
dc.description.scopustc 3 *
dc.date.tcdate 2015-12-28 *
dc.date.scptcdate 2015-11-04 *
dc.identifier.doi 10.1093/nar/gkn241 ko
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