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Bhak, Jong
KOrean GenomIcs Center
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dc.citation.endPage 1112 -
dc.citation.number 7 -
dc.citation.startPage 1104 -
dc.citation.title JOURNAL OF MOLECULAR GRAPHICS & MODELLING -
dc.citation.volume 26 -
dc.contributor.author Kim, Donguk -
dc.contributor.author Cho, Cheol-Hyung -
dc.contributor.author Cho, Youngsong -
dc.contributor.author Ryu, Joonghyun -
dc.contributor.author Bhak, Jong Hwa -
dc.contributor.author Kim, Deok-Soo -
dc.date.accessioned 2023-12-22T08:41:30Z -
dc.date.available 2023-12-22T08:41:30Z -
dc.date.created 2015-07-31 -
dc.date.issued 2008-04 -
dc.description.abstract Proteins consist of atoms. Given a protein, the automatic recognition of depressed regions, called pockets, on the surface of proteins is important for protein-ligand docking and facilitates fast development of new drugs. Recently, computational approaches have emerged for recognizing pockets from the geometrical point of view. Presented in this paper is a geometric method for the pocket recognition which is based on the Voronoi diagram for atoms. Given a Voronoi diagram, the proposed algorithm transforms the atomic structure to meshes which contain the information of the proximity among atoms, and then recognizes depressions on the surface of a protein using the meshes. (c) 2007 Elsevier Inc. All rights reserved -
dc.identifier.bibliographicCitation JOURNAL OF MOLECULAR GRAPHICS & MODELLING, v.26, no.7, pp.1104 - 1112 -
dc.identifier.doi 10.1016/j.jmgm.2007.10.002 -
dc.identifier.issn 1093-3263 -
dc.identifier.scopusid 2-s2.0-40649097302 -
dc.identifier.uri https://scholarworks.unist.ac.kr/handle/201301/13236 -
dc.identifier.url http://www.sciencedirect.com/science/article/pii/S1093326307001507 -
dc.identifier.wosid 000254721700008 -
dc.language 영어 -
dc.publisher ELSEVIER SCIENCE INC -
dc.title.alternative Pocket extraction on proteins via the Voronoi diagram of spheres. -
dc.title Pocket extraction on proteins via the Voronoi diagram of spheres -
dc.type Article -
dc.description.journalRegisteredClass scopus -
dc.subject.keywordAuthor Voronoi diagram of atoms -
dc.subject.keywordAuthor protein -
dc.subject.keywordAuthor pocket -
dc.subject.keywordAuthor binding site -
dc.subject.keywordAuthor docking -
dc.subject.keywordAuthor protein surface -
dc.subject.keywordAuthor blending mesh -
dc.subject.keywordPlus BINDING SITES -
dc.subject.keywordPlus 3D SPHERES -
dc.subject.keywordPlus SURFACES -
dc.subject.keywordPlus CAVITIES -
dc.subject.keywordPlus VOLUME -
dc.subject.keywordPlus SPACE -
dc.subject.keywordPlus ATOMS -
dc.subject.keywordPlus POLYHEDRA -
dc.subject.keywordPlus DENSITY -
dc.subject.keywordPlus DOCKING -

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