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- Bhak, Jong
- KOrean GenomIcs Center
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PSIbase: A database of Protein Structural Interactome map (PSIMAP)
- Alternative Title
- PSIbase: a database of Protein Structural Interactome map (PSIMAP)
- Author(s)
- Gong, Sungsam, Yoon, Giseok, Jang, Insoo, Bolser, Dan, Dafas, Panos, Schroeder, Michael, Choi, Hansol, Cho, Yoobok, Han, Kyungsook, Lee, Sunghoon, Choi, Hwanho, Lappe, Michael, Holm, Liisa, Kim, Sangsoo, Oh, Donghoon, Bhak, Jong Hwa
- Issued Date
- 2005-05
- Citation
- BIOINFORMATICS, v.21, no.10, pp.2541 - 2543
- Abstract
- Protein Structural Interactome map (PSIMAP) is a global interaction map that describes domain-domain and protein-protein interaction information for known Protein Data Bank structures. It calculates the Euclidean distance to determine interactions between possible pairs of structural domains in proteins. PSIbase is a database and file server for protein structural interaction information calculated by the PSIMAP algorithm. PSIbase also provides an easy-to-use protein domain assignment module, interaction navigation and visual tools. Users can retrieve possible interaction partners of their proteins of interests if a significant homology assignment is made with their query sequences
- Publisher
- OXFORD UNIV PRESS
- ISSN
- 1367-4803
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