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A Machine Learning Approach Reveals a Microbiota Signature for Infection with Mycobacterium avium subsp. paratuberculosis in Cattle File

Lee, Sang-Mok , Park, Hong-Tae , Park, Seojoung , Lee, Jun Ho , Kim, Danil , Yoo, Han Sang , Kim, Donghyuk

Article Issue Date2023-01 View89

Blanket antimicrobial resistance gene database with structural information, BOARDS, provides insights on historical landscape of resistance prevalence and effects of mutations in enzyme structure File File

Ko, Seyoung , Kim, Jaehyung , Lim, Jaewon , Lee, Sang-Mok , Park, Joon Young , Woo, Jihoon , Scott-Nevros, Zoe K. , Kim, Jong R. , Yoon, Hyunjin , Kim, Donghyuk

Article Issue Date2024-01 View171

Characterization of Klebsiella pneumoniae bacteriophages, KP1 and KP12, with deep learning-based structure prediction File File

Kim, Youngju , Lee, Sang-Mok , Nong, Linh Khanh , Kim, Jaehyung , Kim, Seung Bum , Kim, Donghyuk

Article Issue Date2023-01 View102

ChEAP: ChIP-exo analysis pipeline and the investigation of Escherichia coli RpoN protein-DNA interactions File File

Bang, Ina , Nong, Linh Khanh , Park, Joon Young , Le, Hoa Thi , Lee, Sang-Mok , Kim, Donghyuk

Article Issue Date2023-01 View111

ChIP-mini: a low-input ChIP-exo protocol for elucidating DNA-binding protein dynamics in intracellular pathogens File

Park, Joon Young , Jang, Minchang , Choi, Eunna , Lee, Sang-Mok , Bang, Ina , Woo, Jihoon , Kim, Seonggyu , Lee, Eun-Jin , Kim, Donghyuk

Article Issue Date2025-02 View37

Deep-learning optimized DEOCSU suite provides an iterable pipeline for accurate ChIP-exo peak calling File

Bang, Ina , Lee, Sang-Mok , Park, Seojoung , Park, Joon Young , Nong, Linh Khanh , Gao, Ye , Palsson, Bernhard O , Kim, Donghyuk

Article Issue Date2023-03 View145

Delineating transcriptional crosstalk between Mycobacterium avium subsp. paratuberculosis and human THP-1 cells at the early stage of infection via dual RNA-seq analysis File File

Park, Hong-Tae , Lee, Sang-Mok , Ko, Seyoung , Kim, Suji , Park, Hyun-Eui , Shin, Min-Kyoung , Kim, Donghyuk , Yoo, Han Sang

Article Issue Date2022-09 View124

Discharge characteristics of a mercury free flat fluorescent lamp without the dielectric layers File

Lee, Sang-Mok , Chung, Kyu-Yong , Sohn, Sang-Ho , Jeong, Byoung-Hyun , Jeong, Yun-Cheol , Kwak, Min-Gi , Park, Lee-Soon

Article Issue Date2007-01 View54

Experimental promoter identification of a foodborne pathogen Salmonella enterica subsp. enterica serovar Typhimurium with near single base-pair resolution File

Lee, Sang-Mok , Le, Hoa Thi , Taizhanova, Assiya , Nong, Linh Khanh , Park, Joon Young , Lee, Eun-Jin , Palsson, Bernhard O. , Kim, Donghyuk

Article Issue Date2024-01 View147

Model-driven experimental design workflow expands understanding of regulatory role of Nac in Escherichia coli File File

Park, JoonYoung , Lee, Sang-Mok , Ebrahim, Ali , Scott-Nevros, ZoeK , Kim, Jaehyung , Yang, Laurence , Sastry, Anand , Seo, SangWoo , Palsson, Bernhard O , Kim, Donghyuk

Article Issue Date2023-01 View112

Pan-genome Analysis Reveals Comparative Genomic Features of Central Metabolic Pathways in Methylorubrum extorquens File

Lee, Gyu Min , Scott-, NevrosZoe K. , Lee, Sang-Mok , Kim, Donghyuk

Article Issue Date2023-12 View125

Simple synthesis of functionalized superparamagnetic magnetite/silica core/shell nanoparticles and their application as magnetically separable high-performance biocatalysts File

Lee, Jinwoo , Lee, Youjin , Youn, Jong Kyu , Bin Na, Hyon , Yu, Taekyung , Kim, Hwan , Lee, Sang-Mok , Koo, Yoon-Mo , Kwak, Jahun , Park, Hyun Gyu , et al

Article Issue Date2008-01 View107

Unveiling the novel regulatory roles of RpoD-family sigma factors in Salmonella Typhimurium heat shock response through systems biology approaches File

Park, Joon Young , Jang, Minchang , Lee, Sang-Mok , Woo, Jihoon , Lee, Eun-Jin , Kim, Donghyuk

Article Issue Date2024-10 View125

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